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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
9
ChIP-seq
1
ATAC-seq
Assay category
9
DNA binding
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
5
broad histone mark
5
nucleotide modification
1
narrow histone mark
Date released
271
August, 2021
202
February, 2023
180
May, 2022
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
80
February, 2021
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
3
December, 2019
1
August, 2018
1
August, 2022
1
September, 2018
Available data
21
bam
bigWig
17
fastq
14
bed narrowPeak
14
tagAlign
7
bigBed narrowPeak
5
bed broadPeak
4
tsv
1
bed bed3+
1
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
13
tissue
6
cell line
1
primary cell
Organ
10
pancreas
9
brain
6
epithelium
1
connective tissue
Project
20
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
10
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
assay_title!
RNA microarray
files.file_type!
bigWig
BIOSAMPLE
ASSAY
20 results
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Clear Filters
MeRIP-seq
ChIP-seq
ATAC-seq
tissue
brain
9
islet of Langerhans
4
cell line
EndoC_BH1
6
primary cell
osteoblast
1
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