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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RNA microarray
27
snATAC-seq
17
ATAC-seq
13
single cell RNA-seq
8
ChIP-seq
1
pCHi-C
Assay category
44
DNA accessibility
13
Transcription
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
294
October, 2019
225
May, 2021
200
June, 2019
200
May, 2022
197
August, 2017
191
August, 2021
175
February, 2023
152
May, 2020
120
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
66
February, 2021
59
September, 2020
51
October, 2018
47
September, 2018
47
September, 2023
41
July, 2019
40
May, 2024
40
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
22
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
14
May, 2023
September, 2017
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2022
1
December, 2019
Available data
121
bam
tsv
101
bigWig
45
fastq
22
bed narrowPeak
8
tagAlign
6
csv
5
txt
1
bed bed3
1
bed bed3+
Organism
66
Homo sapiens
Biosample type
39
primary cell
18
cell line
9
tissue
Organ
14
artery
14
blood vessel
14
heart
14
vasculature
8
bone element
8
skeleton
connective tissue
6
limb
3
liver
Project
39
HPAP
27
AMP
Genome assembly (visualization)
23
hg19
22
GRCh38
Lab
39
Klaus Kaestner, Upenn
27
AMP-T2D consortium
Audit category:
27
audit script error
1
inconsistent replicate
assay_title!
RNA microarray
files.file_type!
tsv
month_released!
September, 2017
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
66 results
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snATAC-seq
ATAC-seq
single cell RNA-seq
ChIP-seq
pCHi-C
primary cell
Langerhans cell
27
12
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
liver
1
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