Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
40
ChIP-seq
small RNA-seq
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
47
Transcription
40
DNA binding
12
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
5
RNA binding protein
5
transcription factor
3
control
Date released
715
February, 2021
406
November, 2017
405
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
75
July, 2019
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
107
bigWig
64
bam
47
bed narrowPeak
47
tsv
8
bed bedMethyl
8
bigBed bedMethyl
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
115
Homo sapiens
Biosample type
95
tissue
20
primary cell
Organ
62
heart
14
connective tissue
12
brain
11
blood vessel
11
vasculature
9
adipose tissue
7
epithelium
7
musculature of body
6
kidney
6
liver
5
limb
3
artery
2
pancreas
1
pericardium
Project
115
AMP
Genome assembly (visualization)
101
GRCh38
58
hg19
Lab
75
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
assay_title!
RRBS
small RNA-seq
BIOSAMPLE
ASSAY
115 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
left cardiac atrium
40
heart left ventricle
2
4
2
gastrocnemius medialis
4
omental fat pad
4
subcutaneous adipose tissue
4
+ See 22 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 14 more…
See all biosamples
Download