Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RRBS
17
WGBS
7
ATAC-seq
Assay category
17
DNA methylation
7
DNA accessibility
Date released
8
July, 2019
7
November, 2018
4
February, 2021
3
February, 2023
2
August, 2017
Available data
3320
bam
3097
bigWig
1771
bed narrowPeak
1574
tsv
1281
fastq
1028
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
17
bed bedMethyl
17
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
24
Homo sapiens
Biosample type
16
tissue
7
in vitro differentiated cells
1
cell line
Organ
6
connective tissue
6
heart
4
pancreas
2
adipose tissue
2
spleen
1
blood vessel
1
limb
1
liver
1
musculature of body
1
vasculature
Project
24
AMP
Genome assembly (visualization)
17
GRCh38
7
hg19
Lab
21
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_title!
RRBS
whole genome sequencing assay
month_released!
September, 2018
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
WGBS
ATAC-seq
tissue
adipose tissue
2
body of pancreas
2
heart left ventricle
2
heart right ventricle
2
pancreas
2
+ See 5 more…
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
HepG2
1
See all biosamples
Download