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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
26
total RNA-seq
14
ATAC-seq
Assay category
36
DNA binding
26
Transcription
14
DNA accessibility
Target of assay
33
histone
33
histone modification
17
broad histone mark
16
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
1
control
Date released
80
May, 2022
61
September, 2018
52
February, 2023
34
October, 2019
33
April, 2018
32
July, 2018
29
August, 2017
19
September, 2020
16
June, 2019
15
December, 2017
7
August, 2020
7
July, 2019
6
December, 2019
6
February, 2021
6
November, 2017
5
September, 2017
4
August, 2021
4
May, 2021
3
August, 2018
3
October, 2022
2
May, 2019
2
October, 2018
1
June, 2018
1
March, 2020
Available data
76
bam
76
fastq
75
bigWig
49
bed narrowPeak
28
bigBed narrowPeak
26
tsv
Organism
76
Homo sapiens
Biosample type
61
primary cell
15
in vitro differentiated cells
Organ
76
epithelium
72
pancreas
63
liver
9
embryo
Project
76
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
76
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
21
missing controlled_by
assay_title!
RRBS
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
in vitro differentiated cells
hepatocyte
15
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