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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
1
DNase-seq
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
10
DNA binding
2
Transcription
1
DNA accessibility
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
11
June, 2019
2
July, 2019
Available data
13
bam
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
78
tissue
13
primary cell
Organ
400
epithelium
346
pancreas
38
connective tissue
36
vasculature
33
kidney
31
blood vessel
22
vein
20
brain
13
liver
13
musculature of body
12
heart
8
blood
8
bodily fluid
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
13
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
13
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
RRBS
award.project!
LungMap
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
DNase-seq
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
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