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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 15ChIP-seq
  • 2DNase-seq
  • RRBS
  • 1total RNA-seq
Assay category
  • 15DNA binding
  • 2DNA accessibility
  • 1Transcription
Target of assay
  • 12histone
  • 12histone modification
  • 6broad histone mark
  • 6narrow histone mark
  • 2RNA binding protein
  • 2transcription factor
  • 1chromatin remodeller
  • 1control
Date released
  • 17August, 2017
  • 1July, 2019
Available data
  • 18bam
  • 18bigWig
  • 16bed narrowPeak
  • 16bigBed narrowPeak
  • 16fastq
  • 14bed broadPeak
  • 14bigBed broadPeak
  • 12tagAlign
  • 1tsv
Organism
  • 18Homo sapiens
Biosample type
  • 18primary cell
Project
  • 18AMP
Genome assembly (visualization)
  • 18hg19
  • 14GRCh38
Lab
  • 18AMP-T2D consortium
Audit category:
  • 2inconsistent assembly
  • 1inconsistent control read length
  • 1inconsistent control run_type
assay_title!
  • RRBS
BIOSAMPLE
ASSAY

18 results

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ChIP-seq
DNase-seq
total RNA-seq
primary cell
skeletal muscle myoblast1521
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