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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
5
ATAC-seq
Assay category
40
DNA binding
5
DNA accessibility
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
40
May, 2024
3
February, 2023
2
August, 2021
Available data
45
bigWig
44
bed narrowPeak
3
bed bedgraph
3
txt
bed bed3+
Organism
45
Homo sapiens
Biosample type
40
tissue
5
in vitro differentiated cells
Organ
40
heart
2
connective tissue
Project
45
AMP
Genome assembly (visualization)
40
GRCh38
5
hg19
Lab
3605
AMP-T2D consortium
341
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
5
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_title!
RRBS
files.file_type!
bed bed3+
bigBed bedMethyl
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
ATAC-seq
tissue
left cardiac atrium
40
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
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