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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
9
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
9
DNA binding
Target of assay
9
control
Date released
54
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
July, 2019
2
May, 2019
Available data
82
bam
65
bigWig
58
tsv
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
67
Homo sapiens
Biosample type
54
cell line
11
tissue
2
primary cell
Organ
705
pancreas
565
connective tissue
448
adipose tissue
362
epithelium
326
liver
200
heart
167
kidney
151
bone element
97
vasculature
96
blood vessel
67
artery
57
brain
29
limb
25
eye
25
musculature of body
22
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
8
skeleton
4
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
67
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
67
AMP-T2D consortium
assay_title!
RRBS
files.file_type!
bed narrowPeak
month_released!
October, 2017
target.investigated_as!
histone
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial artery
1
5
coronary artery
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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