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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
RRBS
Assay category
3
DNA binding
2
DNA accessibility
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
3
November, 2017
2
June, 2019
Available data
5
bam
5
bigWig
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
937
pancreas
784
liver
682
connective tissue
512
epithelium
490
adipose tissue
388
heart
350
kidney
284
brain
232
vasculature
blood vessel
159
bone element
141
artery
122
limb
89
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
5
AMP
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
RRBS
files.file_type!
bedpe bed3+
tar
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
DNase-seq
primary cell
choroid plexus epithelial cell
3
1
smooth muscle cell of the brain vasculature
1
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