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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
14
DNA binding
2
DNA accessibility
Target of assay
8
control
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
November, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
18
bam
18
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
789
pancreas
686
liver
603
connective tissue
457
adipose tissue
425
epithelium
320
kidney
288
heart
163
vasculature
159
blood vessel
159
bone element
121
artery
97
brain
72
limb
68
blood
68
bodily fluid
57
eye
57
musculature of body
25
embryo
20
lung
19
nerve
18
ureter
17
spleen
16
skeleton
7
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
17
AMP-T2D consortium
assay_title!
RRBS
files.file_type!
bigBed bedMethyl
target.investigated_as!
histone
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
14
1
1
1
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