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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
13
ChIP-seq
Assay category
56
Transcription
45
DNA accessibility
13
DNA binding
Target of assay
9
control
4
transcription factor
Date released
66
February, 2021
35
February, 2023
6
October, 2019
3
July, 2019
August, 2021
2
February, 2020
2
May, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
56
tsv
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
114
Homo sapiens
Biosample type
66
cell line
46
tissue
2
primary cell
Organ
849
pancreas
650
connective tissue
480
adipose tissue
436
epithelium
396
liver
205
heart
159
bone element
157
brain
146
vasculature
145
blood vessel
116
kidney
114
artery
54
eye
44
musculature of body
38
limb
29
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
114
AMP
Genome assembly (visualization)
103
GRCh38
68
hg19
Lab
114
AMP-T2D consortium
assay_title!
RRBS
files.file_type!
bigBed narrowPeak
month_released!
August, 2021
organ_slims!
vein
BIOSAMPLE
ASSAY
114 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
2
tibial artery
1
1
5
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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