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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
DNase-seq
1
pCHi-C
Assay category
12
DNA binding
2
DNA accessibility
Target of assay
7
histone
7
histone modification
4
broad histone mark
4
transcription factor
3
narrow histone mark
1
control
Date released
12
August, 2017
1
August, 2018
1
June, 2019
1
November, 2018
Available data
442
bam
425
bigWig
401
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
15
Homo sapiens
Biosample type
14
tissue
1
in vitro differentiated cells
Organ
153
brain
98
liver
78
kidney
55
pancreas
51
musculature of body
50
connective tissue
39
heart
36
limb
30
epithelium
21
vasculature
19
blood vessel
18
ureter
15
adipose tissue
10
artery
4
eye
3
embryo
3
vein
2
nerve
1
pituitary gland
1
spleen
Project
15
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
4
missing controlled_by
assay_title!
RRBS
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
DNase-seq
pCHi-C
tissue
subcutaneous abdominal adipose tissue
8
white adipose tissue
4
omental fat pad
2
in vitro differentiated cells
white fat cell
1
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