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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
869
histone modification
868
histone
496
transcription factor
440
narrow histone mark
427
broad histone mark
106
RNA binding protein
88
recombinant protein
36
chromatin remodeller
23
control
5
other context
5
other post-translational modification
Date released
68
November, 2017
18
November, 2018
7
October, 2019
Available data
94
bam
93
bed narrowPeak
93
bigWig
87
fastq
86
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
93
Homo sapiens
Biosample type
90
cell line
3
tissue
Organ
83
liver
7
kidney
3
spleen
Project
93
AMP
Genome assembly (visualization)
93
GRCh38
90
hg19
Lab
93
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
RRBS
BIOSAMPLE
ASSAY
93 results
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ChIP-seq
cell line
HepG2
83
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
spleen
3
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