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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
9
total RNA-seq
6
WGBS
3
small RNA-seq
1
ATAC-seq
Assay category
50
DNA binding
12
Transcription
6
DNA methylation
1
DNA accessibility
Target of assay
32
histone
32
histone modification
20
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
Date released
386
February, 2021
57
August, 2017
23
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
29
bam
29
bigWig
18
fastq
12
tsv
8
tagAlign
4
bed bed3+
3
bed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed narrowPeak
1
bed broadPeak
Organism
69
Homo sapiens
Biosample type
67
tissue
2
primary cell
Organ
192
pancreas
142
connective tissue
69
adipose tissue
62
liver
36
epithelium
31
musculature of body
23
heart
16
brain
11
blood vessel
11
vasculature
7
kidney
5
limb
3
artery
1
pericardium
Project
69
AMP
Genome assembly (visualization)
28
GRCh38
27
hg19
Lab
69
AMP-T2D consortium
Audit category:
12
missing controlled_by
assay_title!
RRBS
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
small RNA-seq
ATAC-seq
tissue
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
subcutaneous adipose tissue
4
1
1
adipose tissue
2
3
omental fat pad
4
1
primary cell
mesenchymal stem cell of adipose
1
1
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