Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
19
ChIP-seq
Assay category
41
DNA methylation
39
DNA accessibility
19
DNA binding
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
7
August, 2020
7
July, 2019
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
80
zippedFastqFolder
19
bam
19
fastq
16
bed narrowPeak
16
bigWig
14
bigBed narrowPeak
Organism
99
Homo sapiens
Biosample type
80
primary cell
19
in vitro differentiated cells
Organ
104
pancreas
103
liver
99
epithelium
13
embryo
2
musculature of body
Project
80
HPAP
19
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
80
Klaus Kaestner, Upenn
19
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
RRBS
month_released!
January, 2018
BIOSAMPLE
ASSAY
99 results
search-icon
table-tab-icon
Clear Filters
WGBS
ATAC-seq
ChIP-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
Download