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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
Assay category
43
DNA binding
Target of assay
43
histone
43
histone modification
42
transcription factor
25
broad histone mark
24
control
18
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
199
August, 2017
196
October, 2019
140
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
31
December, 2017
30
October, 2018
27
May, 2020
20
August, 2021
19
June, 2019
16
February, 2018
12
October, 2017
10
November, 2019
7
January, 2019
3
March, 2020
Available data
38
fastq
37
bam
36
bed narrowPeak
36
bigWig
23
bigBed narrowPeak
12
tagAlign
10
bed bed3+
3
bed broadPeak
Organism
43
Homo sapiens
Biosample type
24
in vitro differentiated cells
17
tissue
2
stem cell
Organ
17
liver
14
epithelium
12
brain
6
embryo
Project
43
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
43
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
7
inconsistent control read length
assay_title!
RRBS
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
in vitro differentiated cells
hepatocyte
12
pancreatic endoderm
4
Hepatic endoderm
2
Posterior foregut
2
definitive endodermal cell
2
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tissue
brain
12
right lobe of liver
5
stem cell
hESC
2
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