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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
13
total RNA-seq
3
small RNA-seq
1
Hi-C
RRBS
Assay category
27
DNA binding
16
Transcription
1
3D chromatin structure
Target of assay
25
transcription factor
2
RNA binding protein
2
chromatin remodeller
Date released
455
February, 2021
125
August, 2017
27
December, 2018
23
October, 2018
18
January, 2019
18
June, 2019
17
July, 2019
16
November, 2018
14
February, 2023
8
January, 2021
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
January, 2018
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
44
bigWig
43
bam
27
bed narrowPeak
27
bigBed narrowPeak
27
fastq
16
tsv
1
bed bed3+
1
hdf5
Organism
44
Homo sapiens
Biosample type
27
cell line
10
tissue
7
primary cell
Organ
27
blood
27
bodily fluid
23
heart
17
connective tissue
16
brain
12
adipose tissue
11
blood vessel
11
vasculature
10
liver
9
musculature of body
7
epithelium
7
kidney
7
spleen
5
limb
4
pancreas
3
artery
1
pericardium
Project
44
AMP
Genome assembly (visualization)
44
hg19
43
GRCh38
Lab
44
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
RRBS
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
total RNA-seq
small RNA-seq
Hi-C
cell line
GM12878
27
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
primary cell
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
mesangial cell
1
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