Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
5
ATAC-seq
5
total RNA-seq
3
Hi-C
1
MPRA
Assay category
13
DNA binding
5
DNA accessibility
5
Transcription
3
3D chromatin structure
Target of assay
7
control
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
Date released
715
February, 2021
406
November, 2017
405
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
94
December, 2017
93
July, 2019
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
23
bam
23
fastq
16
bigWig
11
bed narrowPeak
11
bigBed narrowPeak
5
tsv
3
bedpe bed3+
3
cool
3
hic
2
bed bed3+
1
txt
Organism
26
Homo sapiens
Biosample type
13
tissue
8
primary cell
6
cell line
Organ
18
blood
bodily fluid
14
pancreas
8
epithelium
7
spleen
5
liver
Project
24
AMP
3
HPAP
Genome assembly (visualization)
21
hg19
18
GRCh38
Lab
24
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assay_title!
RRBS
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
27 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
MPRA
tissue
spleen
7
islet of Langerhans
6
primary cell
pancreatic alpha cell
2
1
pancreatic beta cell
2
1
pancreatic acinar cell
1
1
cell line
HepG2
5
MIN6
1
Download