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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
62
Transcription
12
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Target of assay
control
Date released
712
February, 2021
291
May, 2020
287
August, 2021
250
May, 2021
247
November, 2017
205
February, 2023
200
May, 2022
191
June, 2019
168
July, 2018
157
August, 2017
90
July, 2019
82
November, 2018
79
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
49
November, 2019
47
September, 2023
42
December, 2017
41
September, 2018
31
December, 2018
25
February, 2020
19
April, 2020
19
January, 2019
17
October, 2018
16
January, 2021
15
February, 2018
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
6
April, 2019
5
March, 2019
5
March, 2023
5
May, 2019
5
May, 2024
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
82
bigWig
79
bam
62
tsv
8
bed bedMethyl
8
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
90
Homo sapiens
Biosample type
71
tissue
19
primary cell
Organ
23
heart
17
connective tissue
13
brain
12
adipose tissue
11
blood vessel
11
vasculature
9
liver
9
musculature of body
7
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
90
AMP
Genome assembly (visualization)
76
GRCh38
73
hg19
Lab
90
AMP-T2D consortium
assay_title!
RRBS
target.investigated_as!
control
histone
narrow histone mark
BIOSAMPLE
ASSAY
90 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 22 more…
primary cell
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 12 more…
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