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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
194
total RNA-seq
101
ATAC-seq
50
ChIP-seq
1
DNase-seq
1
pCHi-C
Assay category
194
Transcription
102
DNA accessibility
50
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
217
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
96
May, 2022
94
December, 2017
89
July, 2019
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
289
bam
265
bigWig
193
tsv
50
tagAlign
29
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
347
Homo sapiens
Biosample type
193
tissue
153
primary cell
1
cell line
Organ
194
liver
pancreas
6
connective tissue
6
epithelium
Project
302
AMP
45
T1D
Genome assembly (visualization)
266
hg19
213
GRCh38
Lab
302
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_title!
RRBS
month_released!
December, 2018
organ_slims!
pancreas
BIOSAMPLE
ASSAY
347 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
liver
143
50
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
osteoblast
4
1
1
B cell
2
2
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cell line
HepG2
1
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