Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
total RNA-seq
45
ATAC-seq
29
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
RRBS
Assay category
59
Transcription
49
DNA accessibility
29
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
transcription factor
1
RNA binding protein
Date released
62
February, 2021
35
February, 2023
26
October, 2019
4
July, 2019
4
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
98
bam
81
bigWig
69
bed narrowPeak
59
tsv
24
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
tagAlign
Organism
137
Homo sapiens
Biosample type
72
tissue
62
cell line
3
primary cell
Organ
925
pancreas
643
connective tissue
509
epithelium
474
adipose tissue
451
liver
374
heart
340
kidney
281
brain
226
vasculature
222
blood vessel
159
bone element
136
artery
122
limb
91
musculature of body
59
eye
43
nerve
34
embryo
22
vein
lung
19
spleen
18
blood
18
bodily fluid
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
137
AMP
Genome assembly (visualization)
124
GRCh38
89
hg19
Lab
137
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
lung
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
137 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery
1
36
4
2
tibial artery
1
1
23
2
pulmonary artery
2
cell line
smooth muscle cell of the coronary artery
52
8
2
primary cell
endothelial cell of coronary artery
1
pericardium fibroblast
1
smooth muscle cell of the coronary artery
1
Download