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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
36
DNase-seq
8
ATAC-seq
total RNA-seq
1
WGBS
Assay category
65
DNA binding
44
DNA accessibility
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
17
control
14
narrow histone mark
Date released
64
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
1
July, 2019
Available data
110
bam
92
bed narrowPeak
87
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
110
Homo sapiens
Biosample type
110
tissue
Organ
522
liver
359
pancreas
241
epithelium
238
brain
142
heart
133
kidney
127
vasculature
126
connective tissue
122
blood vessel
110
limb
60
blood
60
bodily fluid
53
musculature of body
48
artery
47
adipose tissue
38
nerve
24
spleen
22
embryo
20
vein
18
ureter
8
bone element
8
skeleton
7
eye
1
pituitary gland
Project
110
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
110
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
STARR-seq
total RNA-seq
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
110 results
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ChIP-seq
DNase-seq
ATAC-seq
WGBS
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
1
muscle of arm
17
distal epiphysis of femur
1
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