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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
316
ChIP-seq
2
MeRIP-seq
Assay category
316
DNA binding
Target of assay
184
control
134
histone
134
histone modification
73
narrow histone mark
61
broad histone mark
2
nucleotide modification
1
RNA binding protein
1
transcription factor
Date released
112
August, 2017
48
October, 2019
31
May, 2020
29
October, 2018
25
November, 2017
23
May, 2019
15
April, 2019
12
December, 2017
9
October, 2017
4
December, 2018
4
September, 2017
3
November, 2018
2
November, 2020
1
January, 2019
Available data
173
bam
122
tagAlign
65
fastq
31
bed narrowPeak
31
bigWig
21
bed broadPeak
1
bigBed narrowPeak
Organism
317
Homo sapiens
Biosample type
318
tissue
89
cell line
71
primary cell
66
in vitro differentiated cells
Organ
73
liver
56
connective tissue
55
adipose tissue
44
brain
41
pancreas
24
musculature of body
19
limb
17
heart
16
blood vessel
16
vasculature
11
nerve
8
spleen
7
artery
6
kidney
4
gonad
4
ovary
2
eye
1
lymph node
Project
318
AMP
Genome assembly (visualization)
GRCh38
441
hg19
Lab
316
AMP-T2D consortium
2
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
1
missing controlled_by
assay_title!
STARR-seq
assembly!
GRCh38
BIOSAMPLE
ASSAY
318 results
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ChIP-seq
MeRIP-seq
tissue
liver
70
islet of Langerhans
46
2
subcutaneous abdominal adipose tissue
36
skeletal muscle tissue
22
tibial nerve
11
+ See 38 more…
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