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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
164
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
1
DNase-seq
Assay category
164
DNA binding
89
Transcription
15
DNA methylation
1
DNA accessibility
Target of assay
91
histone
91
histone modification
53
broad histone mark
50
control
38
narrow histone mark
23
transcription factor
1
RNA binding protein
Date released
647
February, 2021
269
August, 2017
269
May, 2020
208
August, 2021
198
May, 2021
168
July, 2018
125
October, 2019
101
July, 2019
93
November, 2017
57
March, 2020
49
April, 2018
41
February, 2023
31
October, 2018
28
May, 2022
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
6
September, 2017
5
December, 2018
4
August, 2018
4
March, 2019
3
June, 2018
1
August, 2022
1
October, 2022
Available data
287
fastq
282
bam
272
bigWig
bed narrowPeak
89
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
268
Homo sapiens
Biosample type
218
tissue
26
primary cell
25
in vitro differentiated cells
Organ
139
pancreas
79
connective tissue
54
adipose tissue
36
liver
13
musculature of body
12
epithelium
Project
269
AMP
Genome assembly (visualization)
134
hg19
131
GRCh38
Lab
269
AMP-T2D consortium
Audit category:
38
missing controlled_by
assay_title!
STARR-seq
files.file_type!
bed narrowPeak
bedpe
BIOSAMPLE
ASSAY
269 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans
24
89
subcutaneous abdominal adipose tissue
35
3
liver
31
3
1
skeletal muscle tissue
9
4
white adipose tissue
12
+ See 3 more…
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
1
in vitro differentiated cells
adipocyte
25
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