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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
24
DNase-seq
1
Hi-C
Assay category
58
DNA binding
24
DNA accessibility
1
3D chromatin structure
Target of assay
29
transcription factor
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
6
RNA binding protein
2
chromatin remodeller
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
85
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
43
April, 2018
43
December, 2017
39
February, 2018
31
July, 2019
28
December, 2018
23
January, 2019
21
November, 2019
20
March, 2020
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
5
January, 2018
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2023
2
October, 2018
Available data
82
bam
74
bed narrowPeak
74
bigBed narrowPeak
74
bigWig
28
fastq
24
bed bed3+
24
bed broadPeak
24
bigBed broadPeak
Organism
83
Homo sapiens
Biosample type
tissue
55
primary cell
28
cell line
Organ
27
blood
27
bodily fluid
20
epithelium
17
connective tissue
13
kidney
11
musculature of body
8
heart
5
brain
4
eye
4
vasculature
3
liver
2
blood vessel
Project
83
AMP
Genome assembly (visualization)
74
GRCh38
67
hg19
Lab
83
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
1
inconsistent control
assay_title!
STARR-seq
biosample_type!
stem cell
tissue
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
DNase-seq
Hi-C
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
3
1
epithelial cell of proximal tubule
3
1
+ See 17 more…
cell line
GM12878
27
HepG2
1
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