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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
ChIP-seq
2
total RNA-seq
Assay category
165
DNA binding
2
Transcription
Target of assay
59
histone
59
histone modification
57
transcription factor
49
control
33
broad histone mark
26
narrow histone mark
15
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
91
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2023
1
August, 2022
Available data
167
bam
151
fastq
117
bigWig
115
bed narrowPeak
95
bigBed narrowPeak
12
bed bed3+
2
tsv
Organism
167
Homo sapiens
Biosample type
122
tissue
43
in vitro differentiated cells
stem cell
2
primary cell
Organ
63
liver
53
pancreas
23
adipose tissue
23
connective tissue
21
epithelium
13
embryo
Project
167
AMP
Genome assembly (visualization)
121
GRCh38
121
hg19
Lab
167
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
10
inconsistent control read length
assay_title!
STARR-seq
biosample_type!
stem cell
BIOSAMPLE
ASSAY
167 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 2 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
pancreatic acinar cell
2
See all biosamples
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