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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
53
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
45
histone
45
histone modification
26
broad histone mark
19
narrow histone mark
6
RNA binding protein
6
transcription factor
2
control
Date released
705
February, 2021
382
May, 2021
351
August, 2017
303
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
147
May, 2020
120
May, 2019
119
May, 2022
91
November, 2017
87
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
31
December, 2017
30
March, 2020
29
November, 2018
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
77
bed narrowPeak
71
bigWig
59
bam
20
tsv
2
bedpe bed3+
2
hic
Organism
101
Homo sapiens
Biosample type
80
tissue
16
cell line
5
in vitro differentiated cells
Organ
55
pancreas
40
heart
16
epithelium
1
adipose tissue
1
connective tissue
Project
101
AMP
Genome assembly (visualization)
97
GRCh38
59
hg19
Lab
61
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
22
inconsistent ontology term
assay_title!
WGBS
pCHi-C
organ_slims!
liver
BIOSAMPLE
ASSAY
101 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
left cardiac atrium
40
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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