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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
17
small RNA-seq
WGBS
11
RRBS
8
Hi-C
6
ATAC-seq
single cell RNA-seq
1
FAIRE-seq
Assay category
56
Transcription
11
DNA methylation
8
3D chromatin structure
7
DNA accessibility
Date released
688
February, 2021
406
November, 2017
402
August, 2017
399
May, 2021
341
May, 2020
284
October, 2019
204
February, 2023
137
June, 2019
125
May, 2022
120
July, 2018
115
May, 2019
94
December, 2017
91
August, 2021
82
July, 2019
80
November, 2018
76
October, 2018
72
September, 2018
62
March, 2020
61
November, 2019
57
April, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
1
May, 2023
Available data
67
bigWig
63
bam
56
tsv
11
bed bedMethyl
11
bigBed bedMethyl
6
bed narrowPeak
4
bed bed3+
4
hdf5
1
bigBed narrowPeak
Organism
82
Homo sapiens
Biosample type
61
tissue
21
primary cell
Organ
18
connective tissue
17
heart
15
brain
13
epithelium
12
adipose tissue
kidney
10
vasculature
9
blood vessel
9
liver
9
musculature of body
6
pancreas
4
limb
3
artery
2
pericardium
1
eye
Project
82
AMP
Genome assembly (visualization)
77
hg19
62
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
WGBS
single cell RNA-seq
month_released!
February, 2020
organ_slims!
kidney
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
small RNA-seq
RRBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
2
1
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
+ See 20 more…
primary cell
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 14 more…
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