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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
14
DNA binding
2
DNA accessibility
Target of assay
8
control
6
histone
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
November, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
16
bam
16
fastq
8
bed narrowPeak
8
bigWig
7
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
738
pancreas
680
liver
597
connective tissue
450
adipose tissue
379
epithelium
316
kidney
287
heart
162
vasculature
159
bone element
157
blood vessel
121
artery
95
brain
72
limb
68
blood
68
bodily fluid
59
musculature of body
58
eye
25
embryo
20
lung
19
nerve
18
ureter
17
spleen
16
skeleton
6
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
17
AMP-T2D consortium
assay_title!
WGBS
small RNA-seq
audit.ERROR.category!
audit script error
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
14
1
1
1
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