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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
WGBS
39
ATAC-seq
snATAC-seq
Assay category
52
Transcription
39
DNA accessibility
Date released
72
May, 2022
19
September, 2020
Available data
3369
bam
3147
bigWig
1812
bed narrowPeak
1591
tsv
1309
fastq
1037
bigBed narrowPeak
398
tagAlign
321
bed broadPeak
284
bigBed broadPeak
272
bed bed3+
160
txt
91
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
91
Homo sapiens
Biosample type
91
primary cell
Organ
39
epithelium
39
pancreas
Project
91
HPAP
Lab
91
Klaus Kaestner, Upenn
assay_title!
WGBS
snATAC-seq
snDrop-seq
target.investigated_as!
other context
BIOSAMPLE
ASSAY
91 results
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single cell RNA-seq
ATAC-seq
primary cell
Langerhans cell
52
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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