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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
WGBS
6
RRBS
3
DNase-seq
1
FAIRE-seq
Assay category
126
DNA binding
6
DNA methylation
4
DNA accessibility
Target of assay
84
histone
84
histone modification
52
broad histone mark
41
control
32
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
202
August, 2021
159
May, 2022
154
February, 2023
137
February, 2021
136
August, 2017
134
May, 2020
126
November, 2017
October, 2019
75
May, 2021
56
September, 2020
47
September, 2023
42
March, 2020
29
October, 2018
25
February, 2020
25
July, 2019
24
May, 2019
19
April, 2020
16
April, 2019
16
January, 2021
12
December, 2017
10
November, 2020
9
November, 2018
9
October, 2017
8
June, 2019
5
December, 2018
4
January, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
December, 2019
3
March, 2019
3
May, 2023
1
August, 2022
1
September, 2018
Available data
54
tagAlign
31
fastq
28
bam
25
bigWig
24
bed narrowPeak
22
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
4
bigBed narrowPeak
2
bigBed broadPeak
Organism
135
Homo sapiens
Biosample type
119
tissue
in vitro differentiated cells
17
primary cell
Organ
37
adipose tissue
37
connective tissue
36
pancreas
32
liver
26
musculature of body
12
epithelium
Project
136
AMP
Genome assembly (visualization)
227
hg19
GRCh38
Lab
136
AMP-T2D consortium
assay_title!
WGBS
assembly!
GRCh38
biosample_type!
in vitro differentiated cells
month_released!
October, 2019
BIOSAMPLE
ASSAY
136 results
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Clear Filters
ChIP-seq
RRBS
DNase-seq
FAIRE-seq
tissue
subcutaneous abdominal adipose tissue
36
liver
30
1
skeletal muscle tissue
22
4
islet of Langerhans
21
1
pancreas
2
+ See 2 more…
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
1
2
See all biosamples
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