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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
168
ChIP-seq
105
ATAC-seq
Assay category
168
DNA binding
105
DNA accessibility
Target of assay
152
histone
152
histone modification
85
broad histone mark
67
narrow histone mark
16
transcription factor
6
RNA binding protein
Date released
114
May, 2021
80
August, 2021
40
May, 2024
38
May, 2022
1
February, 2023
Available data
305
bigWig
273
bed narrowPeak
201
bam
189
fastq
112
zippedFastqFolder
102
tsv
84
tagAlign
65
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
cool
2
bed bedgraph
2
bed broadPeak
1
bedpe
1
vcf
Organism
273
Homo sapiens
Biosample type
142
tissue
114
primary cell
14
cell line
3
in vitro differentiated cells
Organ
64
kidney
40
heart
34
liver
18
pancreas
2
connective tissue
Project
189
AMP
84
T1D
Genome assembly (visualization)
188
GRCh38
169
hg19
Lab
AMP-T2D consortium
132
Kyle Gaulton, UCSD
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
20
Karen Mohlke, UNC
14
Bing Ren, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
inconsistent ontology term
assay_title!
WGBS
audit.ERROR.category!
inconsistent ontology term
lab.title!
AMP-T2D consortium
organ_slims!
pericardium
BIOSAMPLE
ASSAY
273 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
kidney
64
left cardiac atrium
40
liver
20
islet of Langerhans
18
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
30
cell line
HepG2
14
in vitro differentiated cells
adipocyte
1
embryonic stem cell
1
osteoblast
1
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