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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
9
DNase-seq
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
51
DNA binding
10
DNA accessibility
1
Transcription
Target of assay
48
transcription factor
18
RNA binding protein
16
recombinant protein
3
control
3
other context
3
other post-translational modification
1
chromatin remodeller
Date released
670
February, 2021
402
November, 2017
401
August, 2017
319
August, 2021
314
October, 2019
296
May, 2020
246
May, 2021
218
June, 2019
168
July, 2018
120
May, 2019
106
February, 2023
96
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
62
November, 2018
61
November, 2019
57
March, 2020
49
April, 2018
40
May, 2024
39
February, 2018
25
February, 2020
23
October, 2017
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
7
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
62
fastq
61
bam
57
bed narrowPeak
57
bigBed narrowPeak
57
bigWig
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
1
csv
Organism
62
Homo sapiens
Biosample type
41
cell line
20
tissue
1
primary cell
Organ
48
liver
blood
15
bodily fluid
7
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
62
AMP
Genome assembly (visualization)
56
GRCh38
55
hg19
Lab
62
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
inconsistent control run_type
assay_title!
WGBS
audit.WARNING.category!
inconsistent control run_type
organ_slims!
blood
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
DNase-seq
FAIRE-seq
single cell RNA-seq
cell line
HepG2
41
tissue
spleen
6
1
liver
4
2
body of pancreas
2
brain
2
omental fat pad
1
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primary cell
pancreatic cell
1
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