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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
WGBS
Assay category
18
DNA methylation
Date released
14
July, 2019
4
August, 2017
Available data
3167
bam
2970
bigWig
1672
bed narrowPeak
1483
tsv
1326
fastq
950
bigBed narrowPeak
392
tagAlign
305
bed broadPeak
268
bigBed broadPeak
260
bed bed3+
161
txt
112
zippedFastqFolder
64
xls
18
bed bedMethyl
18
bigBed bedMethyl
12
bed bed3
12
hic
11
bedpe bed3+
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
18
Homo sapiens
Biosample type
9
primary cell
9
tissue
Organ
6
epithelium
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
vasculature
Project
18
AMP
Genome assembly (visualization)
18
hg19
Lab
18
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
WGBS
audit.WARNING.category!
inconsistent control run_type
month_released!
March, 2020
organ_slims!
vasculature
BIOSAMPLE
ASSAY
18 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
See all biosamples
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