Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
48
snATAC-seq
WGBS
46
ATAC-seq
45
single cell RNA-seq
3
Hi-C
Assay category
121
Transcription
94
DNA accessibility
3
3D chromatin structure
Date released
93
May, 2022
76
February, 2023
September, 2020
39
February, 2021
7
August, 2020
3
October, 2022
Available data
122
fastq
93
zippedFastqFolder
7
bigWig
3
bedpe bed3+
3
cool
3
hic
Organism
218
Homo sapiens
Biosample type
218
primary cell
Organ
86
epithelium
86
pancreas
Project
4249
AMP
244
T1D
218
HPAP
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
7
GRCh38
3
hg19
Lab
218
Klaus Kaestner, Upenn
Audit category:
30
audit script error
assay_title!
WGBS
month_released!
May, 2023
September, 2020
BIOSAMPLE
ASSAY
218 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
snATAC-seq
ATAC-seq
single cell RNA-seq
Hi-C
primary cell
Langerhans cell
48
45
pancreatic alpha cell
27
27
1
exocrine cell
39
pancreatic beta cell
10
15
1
pancreatic acinar cell
4
1
Download