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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
WGBS
8
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
15
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Date released
313
August, 2017
271
October, 2019
218
June, 2019
209
May, 2021
183
February, 2023
169
August, 2021
159
May, 2022
152
May, 2020
138
February, 2021
120
May, 2019
94
December, 2017
91
November, 2017
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
40
May, 2024
31
July, 2019
26
November, 2019
24
February, 2018
23
October, 2017
21
November, 2018
19
April, 2020
17
March, 2020
16
January, 2021
15
May, 2023
11
September, 2017
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
6
November, 2020
5
March, 2019
4
July, 2018
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
77
bigWig
73
bam
tsv
15
bed bedMethyl
15
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
31
Homo sapiens
Biosample type
18
tissue
13
primary cell
Organ
8
epithelium
7
brain
6
heart
5
kidney
5
musculature of body
5
vasculature
4
blood vessel
4
limb
2
connective tissue
2
liver
2
pancreas
1
artery
1
eye
1
pericardium
Project
31
AMP
Genome assembly (visualization)
26
hg19
6
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
WGBS
biosample_type!
cell line
files.file_type!
tsv
organ_slims!
skin of body
BIOSAMPLE
ASSAY
31 results
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Clear Filters
RRBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
kidney
1
1
brain
1
coronary artery
1
+ See 7 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
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