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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
Date released
93
May, 2022
19
September, 2020
Available data
2681
bam
2538
bigWig
1459
tsv
1296
bed narrowPeak
912
fastq
608
bigBed narrowPeak
378
tagAlign
259
bed bed3+
250
bed broadPeak
213
bigBed broadPeak
160
txt
112
zippedFastqFolder
64
xls
19
bed bedMethyl
19
bedpe bed3+
19
bigBed bedMethyl
18
hic
11
bed bed3
8
csv
7
bed bedgraph
3
cool
2
hdf5
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
112
Homo sapiens
Biosample type
112
primary cell
Organ
39
epithelium
39
pancreas
Project
112
HPAP
Lab
112
Klaus Kaestner, Upenn
assay_title!
WGBS
biosample_type!
cell line
organ_slims!
blood vessel
vein
BIOSAMPLE
ASSAY
112 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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