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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
Assay category
120
DNA binding
Target of assay
234
histone
234
histone modification
120
broad histone mark
114
narrow histone mark
34
control
9
RNA binding protein
9
transcription factor
1
chromatin remodeller
Date released
66
May, 2021
17
September, 2018
16
August, 2017
12
October, 2019
8
June, 2019
May, 2019
1
August, 2021
Available data
116
bigWig
110
bed narrowPeak
98
bam
51
tagAlign
33
fastq
19
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
120
Homo sapiens
Biosample type
247
tissue
120
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
29
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
4
connective tissue
4
musculature of body
3
kidney
1
liver
Project
76
AMP
44
T1D
Genome assembly (visualization)
116
hg19
94
GRCh38
Lab
64
Kyle Gaulton, UCSD
56
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
assay_title!
WGBS
month_released!
May, 2019
BIOSAMPLE
ASSAY
120 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
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