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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
515
ChIP-seq
Assay category
515
DNA binding
Target of assay
516
histone modification
515
histone
266
narrow histone mark
249
broad histone mark
93
transcription factor
27
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
145
October, 2019
89
May, 2019
60
April, 2019
57
November, 2017
53
August, 2017
35
May, 2024
30
October, 2018
27
May, 2020
6
January, 2019
6
October, 2017
5
December, 2017
2
March, 2020
Available data
515
bigWig
513
bed narrowPeak
459
bam
306
bigBed narrowPeak
180
tagAlign
67
fastq
29
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
515
Homo sapiens
Biosample type
515
tissue
230
primary cell
78
in vitro differentiated cells
37
cell line
2
stem cell
Organ
163
brain
95
heart
59
pancreas
54
blood vessel
54
vasculature
49
liver
48
limb
24
nerve
20
artery
20
kidney
19
musculature of body
6
spleen
2
adipose tissue
2
connective tissue
1
pituitary gland
Project
513
AMP
2
T1D
Genome assembly (visualization)
484
GRCh38
429
hg19
Lab
480
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
7
missing controlled_by
Audit category:
6
inconsistent control read length
assay_title!
WGBS
BIOSAMPLE
ASSAY
515 results
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Clear Filters
ChIP-seq
tissue
liver
44
left cardiac atrium
35
heart left ventricle
24
tibial nerve
24
islet of Langerhans
22
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