Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
WGBS
Assay category
18
DNA binding
8
DNA accessibility
7
Transcription
4
3D chromatin structure
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
23
October, 2019
6
February, 2021
4
July, 2019
3
February, 2020
1
May, 2019
Available data
113
bam
92
bed narrowPeak
90
bigWig
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
37
Homo sapiens
Biosample type
37
tissue
Organ
804
pancreas
650
connective tissue
475
adipose tissue
414
liver
396
epithelium
291
heart
250
kidney
159
bone element
159
brain
151
vasculature
149
blood vessel
116
artery
55
eye
48
musculature of body
37
limb
24
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
10
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
37
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
37
AMP-T2D consortium
assay_title!
WGBS
files.file_type!
bigBed narrowPeak
vcf
month_released!
December, 2017
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
tibial nerve
11
1
5
tibial artery
5
1
1
gastrocnemius medialis
1
4
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 6 more…
See all biosamples
Download