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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ATAC-seq
9
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
1
pCHi-C
Assay category
43
DNA accessibility
9
DNA binding
4
Transcription
Target of assay
9
control
Date released
35
February, 2023
10
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
March, 2020
Available data
102
bam
bigWig
74
bed narrowPeak
59
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
57
Homo sapiens
Biosample type
47
tissue
10
cell line
Organ
276
pancreas
223
kidney
176
epithelium
167
heart
165
liver
110
connective tissue
101
bone element
80
vasculature
79
blood vessel
64
brain
62
adipose tissue
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
57
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
57
AMP-T2D consortium
assay_title!
WGBS
files.file_type!
bigWig
BIOSAMPLE
ASSAY
57 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
2
1
tibial artery
5
1
pulmonary artery
2
adrenal gland
1
cell line
smooth muscle cell of the coronary artery
8
2
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