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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
16
ATAC-seq
4
pCHi-C
2
ChIP-seq
Assay category
17
Transcription
16
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
17
February, 2023
1
February, 2020
Available data
18
bed narrowPeak
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
bigWig
3
tsv
Organism
39
Homo sapiens
Biosample type
39
tissue
Organ
276
pancreas
223
kidney
epithelium
167
heart
165
liver
110
connective tissue
101
bone element
80
vasculature
79
blood vessel
64
brain
62
adipose tissue
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
15
hg19
Lab
39
AMP-T2D consortium
assay_title!
WGBS
files.file_type!
bigWig
organ_slims!
epithelium
lymph node
BIOSAMPLE
ASSAY
39 results
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total RNA-seq
ATAC-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
14
1
4
2
retina
3
15
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