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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
WGBS
Assay category
19
DNA methylation
Date released
15
July, 2019
4
August, 2017
Available data
2561
bam
2273
bigWig
1594
tsv
1111
fastq
957
bed narrowPeak
646
bigBed narrowPeak
257
bed broadPeak
255
bigBed broadPeak
246
bed bed3+
158
txt
112
zippedFastqFolder
77
tagAlign
64
xls
23
bedpe bed3+
23
hic
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
19
Homo sapiens
Biosample type
10
primary cell
9
tissue
Organ
6
epithelium
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
19
AMP
Genome assembly (visualization)
19
hg19
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
WGBS
lab.title!
Struan F.A. Grant, CHOP
month_released!
May, 2019
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
19 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
See all biosamples
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