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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
Date released
93
May, 2022
19
September, 2020
Available data
3210
bam
3006
bigWig
1621
bed narrowPeak
1545
tsv
1341
fastq
925
bigBed narrowPeak
398
tagAlign
240
bed broadPeak
203
bigBed broadPeak
193
bed bed3+
112
zippedFastqFolder
99
txt
22
bedpe bed3+
20
hic
15
bed bedMethyl
15
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
3
cool
3
csv
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
112
Homo sapiens
Biosample type
112
primary cell
Organ
39
epithelium
39
pancreas
Project
112
HPAP
Lab
112
Klaus Kaestner, Upenn
assay_title!
WGBS
month_released!
February, 2020
organ_slims!
kidney
vein
BIOSAMPLE
ASSAY
112 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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