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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
WGBS
1
ATAC-seq
1
DNase-seq
1
RRBS
Assay category
48
DNA binding
2
DNA accessibility
1
DNA methylation
Target of assay
33
histone modification
32
histone
19
broad histone mark
13
narrow histone mark
11
control
4
transcription factor
Date released
315
November, 2017
194
May, 2020
63
December, 2017
52
November, 2018
51
August, 2017
40
May, 2022
35
August, 2021
9
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
27
fastq
26
bam
20
tagAlign
18
bed narrowPeak
18
bigWig
6
bigBed narrowPeak
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
51
Homo sapiens
Biosample type
51
tissue
Organ
188
pancreas
119
connective tissue
51
adipose tissue
51
liver
29
epithelium
26
musculature of body
Project
51
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent control read length
assay_title!
WGBS
month_released!
October, 2017
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
ATAC-seq
DNase-seq
RRBS
tissue
liver
48
1
right lobe of liver
1
1
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