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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 44total RNA-seq
  • 18small RNA-seq
  • 15RRBS
  • WGBS
  • 8Hi-C
  • 6ATAC-seq
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 65Transcription
  • 15DNA methylation
  • 83D chromatin structure
  • 8DNA accessibility
Target of assay
  • 3control
Date released
  • 709February, 2021
  • 406November, 2017
  • 402August, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 168July, 2018
  • 159May, 2022
  • 120May, 2019
  • 96July, 2019
  • 94December, 2017
  • 81November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 77bigWig
  • 73bam
  • 65tsv
  • 15bed bedMethyl
  • 15bigBed bedMethyl
  • 7bed narrowPeak
  • 4bed bed3+
  • 4hdf5
  • 2bigBed narrowPeak
Organism
  • 96Homo sapiens
Biosample type
  • 65tissue
  • 31primary cell
Organ
  • 18brain
  • 18connective tissue
  • 17heart
  • 13epithelium
  • 12adipose tissue
  • 11kidney
  • 10vasculature
  • 9blood vessel
  • 9liver
  • 9musculature of body
  • 6pancreas
  • 4limb
  • 3artery
  • 2pericardium
  • 1eye
Project
  • 96AMP
Genome assembly (visualization)
  • 91hg19
  • 71GRCh38
Lab
  • 96AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
assay_title!
  • WGBS
BIOSAMPLE
ASSAY

96 results

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Clear Filters
total RNA-seq
small RNA-seq
RRBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle212
omental fat pad41
subcutaneous adipose tissue41
body of pancreas22
gastrocnemius medialis4
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
mesenchymal stem cell of adipose11
renal cortical epithelial cell11
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