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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 44total RNA-seq
  • 18small RNA-seq
  • 15RRBS
  • WGBS
  • 8Hi-C
  • 6ATAC-seq
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 65Transcription
  • 15DNA methylation
  • 83D chromatin structure
  • 8DNA accessibility
Target of assay
  • 3control
Date released
  • 709February, 2021
  • 406November, 2017
  • 402August, 2017
  • 399May, 2021
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 168July, 2018
  • 159May, 2022
  • 120May, 2019
  • 96July, 2019
  • 94December, 2017
  • 81November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 77bigWig
  • 73bam
  • 65tsv
  • 15bed bedMethyl
  • 15bigBed bedMethyl
  • 7bed narrowPeak
  • 4bed bed3+
  • 4hdf5
  • 2bigBed narrowPeak
Organism
  • 96Homo sapiens
Biosample type
  • 65tissue
  • 31primary cell
Organ
  • 18brain
  • 18connective tissue
  • 17heart
  • 13epithelium
  • 12adipose tissue
  • 11kidney
  • 10vasculature
  • 9blood vessel
  • 9liver
  • 9musculature of body
  • 6pancreas
  • 4limb
  • 3artery
  • 2pericardium
  • 1eye
Project
  • 96AMP
Genome assembly (visualization)
  • 91hg19
  • 71GRCh38
Lab
  • 96AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
assay_title!
  • WGBS
BIOSAMPLE
ASSAY

96 results

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Clear Filters
total RNA-seq
small RNA-seq
RRBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle212
omental fat pad41
subcutaneous adipose tissue41
body of pancreas22
gastrocnemius medialis4
right lobe of liver22
frontal cortex111
heart21
liver21
right atrium auricular region21
thoracic aorta21
diencephalon11
kidney11
metanephros11
occipital lobe11
parietal lobe11
skeletal muscle tissue11
temporal lobe11
ascending aorta1
brain1
cerebellum1
cerebellum (Hemisphere)1
coronary artery1
islet of Langerhans1
pancreas1
pericardium1
posterior cingulate cortex1
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
mesenchymal stem cell of adipose11
renal cortical epithelial cell11
skeletal muscle satellite cell11
Purkinje cell1
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
cardiac atrium fibroblast1
cardiac fibroblast1
cardiac muscle cell1
cardiac ventricle fibroblast1
choroid plexus epithelial cell1
endothelial cell of coronary artery1
endothelial cell of hepatic sinusoid1
glomerular endothelial cell1
hepatocyte1
mesangial cell1
pericardium fibroblast1
retinal pigment epithelial cell1
skeletal muscle cell1
skeletal muscle myoblast1
smooth muscle cell of the coronary artery1
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