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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
9
DNase-seq
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
61
DNA binding
10
DNA accessibility
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
control
3
other context
other post-translational modification
Date released
706
February, 2021
390
May, 2021
352
August, 2017
333
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
168
July, 2018
159
May, 2022
97
May, 2019
93
July, 2019
73
December, 2017
73
September, 2018
72
November, 2018
66
April, 2019
63
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
72
fastq
71
bam
70
bed narrowPeak
70
bigBed narrowPeak
70
bigWig
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
1
csv
Organism
72
Homo sapiens
Biosample type
57
cell line
14
tissue
1
primary cell
Organ
52
liver
12
blood
12
bodily fluid
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
72
AMP
Genome assembly (visualization)
69
GRCh38
68
hg19
Lab
72
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
WGBS
organ_slims!
mammary gland
target.investigated_as!
control
other post-translational modification
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
GM12878
12
tissue
liver
4
2
body of pancreas
2
brain
2
omental fat pad
1
pancreas
1
+ See 2 more…
primary cell
pancreatic cell
1
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