Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
9
single cell RNA-seq
7
ChIP-seq
2
Hi-C
1
FAIRE-seq
pCHi-C
Assay category
11
DNA accessibility
9
Transcription
7
DNA binding
2
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
2
control
1
narrow histone mark
Date released
19
April, 2020
9
October, 2019
1
March, 2020
Available data
8
bam
3
bigWig
2
bed broadPeak
2
bigBed broadPeak
2
hic
1
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
1
tar
Organism
28
Homo sapiens
Biosample type
19
tissue
10
primary cell
Organ
310
pancreas
257
liver
230
epithelium
147
kidney
124
heart
113
connective tissue
92
bone element
67
brain
65
adipose tissue
51
eye
44
vasculature
42
blood vessel
42
musculature of body
26
limb
19
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
8
embryo
8
skeleton
8
spleen
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
19
LungMap
10
AMP
Genome assembly (visualization)
17
hg19
GRCh38
Lab
19
Xin Sun, UCSD
10
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
pCHi-C
assembly!
GRCh38
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
single cell RNA-seq
ChIP-seq
Hi-C
FAIRE-seq
tissue
lung
10
9
primary cell
endothelial cell of umbilical vein
7
2
1
Download