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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
2
Hi-C
Assay category
58
Transcription
2
3D chromatin structure
Date released
52
February, 2021
5
July, 2019
3
March, 2020
Available data
159
bam
153
bigWig
97
bed narrowPeak
82
bigBed narrowPeak
58
tsv
16
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
6
fastq
4
tagAlign
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
60
Homo sapiens
Biosample type
52
cell line
5
tissue
3
primary cell
Organ
474
connective tissue
414
pancreas
398
adipose tissue
164
liver
152
epithelium
73
heart
60
blood vessel
60
vasculature
58
bone element
54
artery
14
embryo
12
brain
12
kidney
8
musculature of body
4
limb
4
nerve
1
pericardium
1
vein
Project
60
AMP
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
60
AMP-T2D consortium
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
60 results
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total RNA-seq
Hi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
1
thoracic aorta
2
ascending aorta
1
primary cell
endothelial cell of coronary artery
1
endothelial cell of umbilical vein
1
smooth muscle cell of the coronary artery
1
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